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基于高通量测量技术的发展,目前在GeneBank数据库中已获得了27种菊科植物叶绿体基因组全序列。尽管叶绿体基因组全序列在捕获进化事件的功能方面是有一定分歧的,但由于其高度的保守性和较低的进化速率,使其在不同物种间的系统进化研究中具有更好的统一性,从而使叶绿体基因组全序列成为一个更适合研究分子系统发育与分子生态学的宝贵工具。本研究对27种菊科植物叶绿体全基因组序列进行了系统分析,内容包括全基因组序列的大小,基因组容量,LSC,SSC,IR-LSC/SSC边界,假基因和DNA条形码等。基于上述信息,植物叶绿体基因组为菊科植物的分类鉴定和定位提供了更加准确的证据。
Abstract：Until now, based on the development of high-throughput measuring technology, complete sequences of chloroplast genomes of twenty-seven Asteraceae species were obtained in the GeneBank database. Although divergent was existed for complete sequence of chloroplast genome in function of capturing evolutionary events,the high degree of conservation and low evolutionary rate of the chloroplast genome demonstrated better unity in phylogenetic studies across different species, which made the complete sequence of chloroplast genome a more suitable and invaluable tool for molecular phylogeny and molecular ecology studies. The research systematically analyzed the complete sequence of chloroplast genome of 27 Asteraceae species, including the size, genome content, LSC, SSC, IR-LSC/SSC borders, pseudogenes and DNA barcodes. Based on the above information, the chloroplast genome of each species would provide a more accurate evidence for the classification, identification and localization of Asteraceae species.
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基本信息:
DOI：10.13417/j.gab.037.005437
中图分类号:Q943
引用信息:
[1]梁凤萍,文祥宁,高赫一,等.菊科植物叶绿体基因组特征分析[J].基因组学与应用生物学,2018,37(12):5437-5447.DOI:10.13417/j.gab.037.005437.
基金信息:
国家自然科学基金项目(31360173; 71361008);; 海南省自然科学基金(417103);; 海南师范大学2017年大学生创新项目共同资助
2018-12-25
2018-12-25