基因组学与应用生物学

参考文献

Akkaya M.S.,Bhagwat A.A.,and Cregan P.B.,1992,Lengthpolymorphisms of simple sequence repeat DNA in soybean,Genetics,132(4):1131-1139

Coulson A.,Sulston J.,Brenner S.,and Karn J.,1986,Toward aphysical map of the genome of the nematode Caenorhabdi-tis elegans,Proc.Natl.Acad.Sci.,USA,83(20):7821-7825

Chen G.,and Du X.M.,2006,Genetic diversity of sourcegermplasm of upland cotton in China as determined by SSRmarker analysis,Yichuan Xuebao(Acta Geneti ca Sinica),33(8):733-745(陈光,杜雄明,2006,我国陆地棉基础种质遗传多样性的SSR分子标记分析,遗传学报,33(8):733-745)

Chen L.J.,Guo Q.,Liu Y.X.,Li X.Y.,Zhao Y.L.,Shan D.P.,and Chen Q.S.,2009,SSR markers for resistance gene to Cer-cospora sojina hara race1,Zhongguo Nongxue Tongbao(Chinese Agricultural Science Bulletin),25(9):43-46(陈立军,郭强,刘迎雪,李祥羽,赵远玲,单大朋,陈庆山,2009,大豆灰斑病1号生理小种抗性基因的SSR标记,中国农学通报,25(9):43-46)

Chen M.,Presting G.,Barbazuk W.B.,Goicoechea J.L.,Black-mon B.,Fang G.,Kim H.,Frisch D.,Yu Y.,Sun S.,Higing-bottom S.,Phimphilai J.,Phimphilai D.,Thurmond S.,Gaudette B.,Li P.,Liu J.,Hatfield J.,Main D.,Farrar K.,Henderson C.,Barnett L.,Costa R.,Williams B.,Walser S.,Atkins M.,Hall C.,Budiman M.A.,Tomkins J.P,Luo M.,Bancroft I.,Salse J.,Regad F.,Mohapatra T.,Singh N.K.,Tyagi A.K.,Soderlund C.,Dean R.A.,and Wing R.A.,2002,An integrated physical and genetic map of the ricegenome,The Plant Cell,14(3):537-545

Chen Q.Q.,and Zhang Y.S.,2009,Distorted segregation andconstruction of molecular linkage map of SSR markers inindica rice,Fenzi Zhiwu Yuzhong(Molecular Plant Breeding),7(4):685-689(陈庆全,张玉山,2009,籼型水稻SSR标记遗传连锁图谱的构建及偏分离分析,分子植物育种,7(4):685-689)

Copeland N.G.,Jenkins N.A.,Gilbert D.J.,Eppig J.T.,Maltais L.J.,Miller J.C.,Dietrich W.F.,Weaver A.,Lincoln S.E.,Steen R.G.,Stein L.D.,Nadeau J.H.,and Lander E.S.,1993,A genetic linkage map of the mouse:current applicationsand future prospects,Science,262(5310):57-66

Cregan P.B.,Jarvik T.,Bush A.L.,Shoemaker R.C.,Lark K.G.,Kahler A.L.,Kaya N.,VanToai T.T.,Lohnes D.G.,Chung J.,and Specht J.E.,1999,An integratedgenetic linkagemap ofthe soybean genome,Crop Sci.,39:1464-l490

Devey M.E.,Smith D.N.,Neale D.B.,Moran G.F.,and Bell J.C.,1996,A genetic linkage map for Pinus radiata based onRFLP,RAPD and microsatellite markers,Theor.Appl.Genet.,92(6):673-679

David N.S.,and Michael E.D.,1994,Occurrence and inheritanceof microsatellites in Pinus radiata,Genome,37(6):977-983

Frary A.,Nesbitt T.C.,Fray A.,Grandillo S.,Knaap E.V.D.,Cong B.,Liu J.P.,Meller J.,Elber R.,Alpert K.B.,andTanksley S.D.,2000,fW2:a quantitative trait locus key tothe evolution of tomato fruit size,Science,289(7):85-88

Feng Z.G.,Zhang L.L.,Zheng Y.Z.,and Ling H.Q.,2005,Furthermolecular evidence for the Hordeum vulgare ssp.Sponta-neum in Tibet as ultimate progenitor of chinese culivatedbarley,High Technology Letters,11(3):320-324

Goff S.A.,Ricke D.,Lan T.H.,Presting G.,Wang R.,Dunn M.,Glazebrook J.,Sessions A.,Oeller P.,Varma H.,Hadley D.,Hutchison D.,Martin C.,Katagiri F.,Lange B.M.,Moughamer T.,Xia Y.,Budworth P.,Zhong J.,Miguel T.,Paszkowski U.,Zhang S.,Colbert M.,Sun W.L.,Chen L.,Cooper B.,Park S.,Wood T.C.,Mao L.,Quail P.,Wing R.,Dean R.,Yu Y.,Zharkikh A.,Shen R.,Sahasrabudhe S.,Thomas A.,Cannings R.,Gutin A.,Pruss D.,Reid J.,Tavti-gian S.,Mitchell J.,Eldredge G.,Scholl T.,Miller R.M.,Bhatnagar S.,Adey N.,Rubano T.,Tusneem N.,RobinsonR.,Feldhaus J.,Macalma T.,Oliphant A.,and Briggs S.,2002,A draft sequence of the rice genome(Oryza sativa L.ssp.Japonica),Science,296(5565):92-100

Huang C.Z.,Huang W.Z.,Yan M.J.,Hu J.T.,Lv Z.W.,Lei S.F.,and Ran Y.X.,2005,Identification of true or false and purityof hybrid rice with SSR molecular marker,Anhui NongyeKexue(Journal of Anhui Agricultural Science),37(8):3437-3438(黄成志,黄文章,严明建,胡景涛,吕直文,雷树凡,冉彦秀,2009,利用SSR分子标记鉴定杂交水稻真伪与纯度,安徽农业科学,37(8):3437-3438)

Hohmann U.,Jacobs G.,Telgmann A.,Gaafar R.M.,Alam S.,and Jung C.,2003,A bacterial artificial chromosome(BAC)library of sugar beet and a physical map of the region en-compassing the boling gene B,Mol.Gen.Genomics,269(1):126-136

Huang Y.J.,Hua Y.P.,Liu H.Q.,Su J.,Chen J.M.,and Wang F.,2008,Construction of three SSR genetic E-maps based onrice cultivar Minghui86,Fenzi Zhiwu Yuzhong(MolecularPlant Breeding),6(4):655-663(黄燕娟,华亚鹏,刘华清,苏军,陈建民,王锋,2008,三个基于水稻明恢86的SSR电子遗传图谱的构建,分子植物育种,6(4):655-663)

Jiang Y.M.,Li T.C.,Meng C.,and Liang Q.P.,2009,Identifica-tion on seed purity of maize hybrid Nanxiao18by SSRmarker,Guangxi Nongye Kexue(Guangxi Agricultural Sci-ences),40(5):464-467(蒋益敏,李体琛,蒙成,梁庆平,2009,利用SSR标记鉴定玉米杂交种南校18号种子纯度,广西农业科学,40(5):464-467)

Lv G.L.,Lin Z.L.,Bai X.G.,Kyung-Ho M.,Fu J.,Liu F.F.,Huang X.Q.,Jae-Gyun G.,and Cheng Z.Q.,2009,Compara-tive assessment of simple sequence repeat genetic diverity incultivated rice from yunnan,Zhiwu Xuebao(Chinese Bul-letin of Botany),44(4):457-463(吕广磊,蔺忠龙,白现广,Kyung-Ho Ma,付坚,刘芳芳,黄兴奇,Jae-Gyun Gway,程在全,2009,云南栽培稻种SSR遗传多样性比较,植物学报,44(4):457-463)

Ling H.Q.,and Beat K.,2001,Towards map-based cloning of theleaf rust dis ease resistance gene Lr1in wheat,Yichuan(Hereditas)(Beijing)),23(1):44(凌宏清,Beat Keller,2001,图位克隆小麦抗叶锈基因Lr1,遗传,23(1):44)

Liu S.T.,Li W.D.,Lu W.G.,and Zhang S.,2003,RFLP andRAPD technology and its application in identification ofplant nematodes,Henan Nongye Kexue(Journal of HenanAgricultural Sciences),10:31-33(刘世涛,李卫东,卢为国,张穗,2003,RFLP和RAPD技术及其在植物线虫鉴定中的应用,河南农业科学,10:31-33)

Li W.,Zhou L.M.,Wang H.L.,Zhang M.C.,Liu Z.Q.,and GuoQ.H.,2009,SNP technology and its application in animalhusbandry,Heilongjiang Dongwu Fanzhi(HerlongjiangJournal of Animal Reproduction),6(17):11-12(李伟,周立民,王洪亮,张明臣,刘增清,郭权和,2009,SNP技术及其在畜牧业中的应用,黑龙江动物繁殖,6(17):11-12)

Li X.Y.,Qian Q.,Fu Z.M.,Wang Y.H.,Xiong G.S.,Zeng D.L.,Wang X.Q.,Liu X.F.,Teng S.,Hiroshi F.,Yuan M.,Luo D.,Han B.,and Li J.,2003,Control of tilleringin rice,Nature,422:618-621

Manifesto M.M.,Schlatter A.R.,Hopp H.E.,Súarez E.Y.,andDubcovsky J.,1999,Bread wheat(Triticum aestivum)fin-gerprinting using microsatellites In:Intermational Plant andAnimal Genome Conference:Abstract,San Diego,CA,pp.137

Nguyen T.B.,Giband M.,Brottier P.,Risterucci A.M.,and La-cape J.M.,2004,Wide coverage of the tetraploid cottongenome using newly developed microsatellite markers,Theor.Appl.Genet.,109(1):167-175

Primmer C.R.,and Ellegren H.,1998,Patterns of molecularevolution in avian microsatellites,Mol.Biol.Evol.,15(8):997-1008

Qin J.,Li Y.H.,Liu Z.X.,Guan R.X.,Zhang M.C.,Chang R.Z.,Li G.M.,Ma Z.Y.,and Qiu L.J.,2008,Genetic rela-tionship among parents of elite soybean(Glycine max),cultivars Suinong14pedigree revealed by SSR markers,Zhongguo Nongye Kexue(Scientia Agricultura Sinica),41(12):3999-4007(秦君,李英慧,刘章雄,关荣霞,张孟臣,常汝镇,李广敏,马峙英,邱丽娟,2008,用SSR分子标记解析大豆品种绥农14与系谱亲本间的遗传关系,中国农业科学,41(12):3999-4007)

Rongwen J.,Akkaya M.S.,Bhagwat A.A.,Lavi U.,and CreganP.B.,1995,The use of microsatellite DNA markers for soy-bean genotype identification,Theor.Appl.Genet.,90(1):43-48

Song X.F.,Song T.M.,Dai J.R.,Rocheford T.,and Li J.S.,2004,QTL mapping of kernel oil concen tration with highoilmaizeby SSR markers,Maydica,49(1):41-48

Teng W.L.,Li W.B.,Han Y.P.,Qiu L.J.,Chang R.Z.,and GuanR.X.,2008,Identification of the SMV resistance assessmentand assisted selection SSR markers in soybean,ZhongguoYouliao Zuowu Xuebao(Chinese Journal of Oil Crop Sci-ences),30(2):224-228(滕卫丽,李文滨,韩英鹏,邱丽娟,常汝镇,关荣霞,2008,大豆种质对SMV抗性鉴定的SSR辅助选择,中国油料作物学报,30(2):224-228)

Tang Y.,Fu T.H.,and Jia M.J.,2008,SSR Marker of a novelwheat powdery mildew resistance gene,Huabei Nongxue-bao(Acta Agriculturae Boreali-Sinica),23(5):127-130(唐媛,傅体华,贾明娟,2008,SSR标记定位一个新的小麦白粉病抗性基因,华北农学报,23(5):127-130)

Wang H.Y.,Wang X.E.,Chen P.D.,and Liu D.J.,2007,Assess-ment of genetic diversity of Yunnan,Tibetan,and Xinjiangwheat using SSR markers,Journal of Genetics and Ge-nomics,34(7):623-633

Wang L.F.,Li H.Y.,Tang B.J.,Cheng Z.Q.,Wang Z.H.,and TieS.G.,2009,Genetic diversity analysis of Henan maize lan-drace by phenotype and simple sequence repeat(SSR)markers,Zhongguo Nongye Kexue(Scientia AgriculturaSinica),42(4):1136-1144(王利锋,李会勇,唐保军,程泽强,王振华,铁双贵,2009,利用表型和SSR标记分析河南省玉米地方品种的遗传多样性,中国农业科学,42(4):1136-1144)

Wang Z.,Weber J.,Zhong G.,and Tanksley S.D.,1994,Surveyof plant short tandem DNA repeats,Theor.Appl.Genet.,88(1):1-6

Wu C.Y.,You C.J.,Li C.H.,Long T.,Chen G.X.,Byrne M.E.,and Zhang Q.F.,2008,Encoding a Cys2/His2-type zincfinger transcription factor,acts as a master switch fromvegetative to floral development in rice,PNAS,105(35):12915-12920

Xing D.Q.,Cao H.H.,Cao Y.G.,Yang J.P.,Hang L.J.,Wang S.C.,and Dai J.R.,2001,Construction of a genetic map andlocation of quantitative trait loci for yield component traitsin maize by SSR markers,Yichuan Xuebao(Acta GeneticaSinica),28(8):778-784(向道权,曹海河,曹永国,杨俊品,黄烈健,王守才,戴景瑞,2001,玉米SSR遗传图谱的构建及产量性状基因定位,遗传学报,28(8):778-784)

Xu J.J.,Wang X.M.,Wu X.F.,and Zhu Z.D.,2009,Developmentof polymorphic SSR markers for Phytophthora sojae andanalysis of the genetic diversity,Zhiwu Bingli Xuebao(ActaPhytopathologica Sinica),39(4):337-346(徐静静,王晓鸣,武小菲,朱振东,2009,大豆疫霉多态性SSR标记开发及遗传多样性分析,植物病理学报,39(4):337-346)

Xing J.Y.,and Shuai S.R.,2001,RFLP and PCR-RFLP technolo-gy and molecular breeding pigs,Xuqinye(Livestock andPovltry Indvstry),7:24-25(邢晋祎,帅素容,2001,RFLP-PCR-RFLP技术与猪分子育种,畜禽业,7:24-25)

Yao H.W.,Yuan X.,Fu X.,and Jing N.N.,2009,AFLP molecu-lar marker technique an d its application in aquatic animals,Xiandai Yuye Xinxi(Modern Fisheries Infor mation),7(24):22-24(姚红伟,袁霞,付鑫,景娜娜,2009,AFLP分子标记技术及其在水产动物中的应用,现代渔业信息,7(24):22-24)

Yu J.,Hu S.,Wang J.,Wong G.K.,Li S.,Liu B.,Deng Y.J.,DaiL.,Zhou Y.,Zhang X.Q.,Cao M.L.,Liu J.,Sun J.D.,TangJ.B.,Chen Y.J.,Huang X.B.,Lin W.,Ye C.,Tong W.,CongL.J.,Geng J.N.,Han Y.J.,Li L.,Li W.,Hu G.Q.,Huang X.G.,Li W.J.,Li J.,Liu Z.W.,Li L.,Liu J.P.,Qi Q.H.,Liu J.S.,Li L.,Li T.,Wang X.G.,Lu H.,Wu T.T.,Zhu M.,Ni P.X.,HanH.,Dong W.,Ren X.Y.,Feng X.L.,Cui P.,Li X.R.,WangH.,Xu X.,Zhai W.X.,Xu Z.,Zhang J.S.,He S.,Zhang J.G.,Xu J.C.,Zhang K.L.,Zheng X.W.,Dong J.H.,Zeng W.F.,Tao L.,Ye J.,Tan J.,Ren X.,Chen X.W.,He J.,Liu D.F.,Tian W.,Tian C.G.,Xia H.A.,Bao Q.Y.,Li G.,Gao H.,CaoT.,Wang J.,Zhao W.M.,Li P.,Chen W.,Wang X.D.,ZhangY.,Hu J.F.,Wang J.,Liu S.,Yang J.,Zhang G.Y.,Xiong Y.Q.,Li Z.J.,Mao L.,Zhou C.S.,Zhu Z.,Chen R.S.,Hao B.C.,Zheng W.M.,Chen S.Y.,Guo W.,Li G.J.,Liu S.Q.,Tao M.,Wang J.,Zhu L.H.,Yuan L.P.,and Yang H.M.,2002,A draftsequence of the rice genome(Oryza sativa L.ssp indica),Science,296(5565):79-92

Yao W.H.,Luo L.M.,Wang Y.F.,Huang Y.X.,Duan Z.L.,Xu C.X.,Chen H.M.,Tan J.,and Fan X.M.,2009,Heteroticgrouping of27maize inbred lines divided by SSR markersand yields,Yumi Kexue(Journal of Maize Sciences),17(1):54-58(姚文华,罗黎明,汪燕芬,黄云霄,段智利,徐春霞,陈洪梅,谭静,番兴明,2009,利用SSR标记和产量对27份玉米自交系进行杂种优势群划分,玉米科学,17(1):54-58)

Zhang G.L.,Chen L.Y.,Xiao G.Y.,Xiao Y.H.,Chen X.B.,andZhang S.T.,2009,Bulked segregant analysis to detect QTLrelated to heat tolerance in rice(Oryza sativa L.)using SSRmarkers,Agricultural Sciences in China,8(4):482-487

Zhang J.,Liu X.J.,Sun J.L.,Jia Y.H.,and Du X.M.,2009,SSRand agronomic characters analysis of the introgressed linesfrom interspecific hybridization in cotton,Zhiwu YichuanZiyuan Xuebao(Journal of Plant Genetic Resources),10(1):60-67(张杰,刘晓杰,孙君灵,贾银华,杜雄明,2009,棉花种间杂交渐渗系SSR及农艺性状分析,植物遗传资源学报,10(1):60-67)

Zhang P.,Dreisigacker S.,Buerkert A.,Alkhanjari S.,MelchingerA.E.,and Warburton M.L.,2006,Genetic diversity and rela-tionships of wheat landraces from Oman investigated withSSR markers,Genetic Resources and Crop Evolution,53(7):1351-1360

Zhao W.G.,Miao X.X.,Pan Y.L.,and Huang Y.P.,2006,SSRand ISSR molecular markers and their usage in genetics andbreeding of mulberry tress,Jiangsu Canye(Jiangsu Sericul-ture),28(4):1-5(赵卫国,苗雪霞,潘一乐,黄勇平,2006,SSR和ISSR分子标记及其在桑树遗传育种研究中的应用前景,江苏蚕业,28(4):1-5)

Zhu M.X.,Li Y.Z.,Wang J.S.,Hou Y.M.,and Meng Y.L.,2005,Purity identification of cotton varieties with SSR technique,Anhui Nongye Kexue(Journal of Anhui Agricultural Sci-ences),33(11):2010-2016(朱美霞,李英芝,王建书,侯英梅,孟艳玲,2005,利用SSR方法鉴定棉花品种纯度,安徽农业科学,33(11):2010-2016)