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2017, 12, v.36 5238-5243
苜蓿14-3-3基因家族的鉴定与进化和特征分析
基金项目(Foundation): 贵州省科学技术基金(2017GZ66249)资助
邮箱(Email):
DOI: 10.13417/j.gab.036.005238
发布时间: 2017-12-25
出版时间: 2017-12-25
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摘要:

蛋白质磷酸化是所有真核生物中都存在的重要信号传导机制,在生命过程的多个基础性环节,包括细胞分裂、分化、凋亡等,都起着中心的调控作用。14-3-3蛋白是在所有真核生物中都存在的,识别和调控磷酸化蛋白质活性,在磷酸化信号传导网络中是一个基础性的中心蛋白。我们筛选鉴定了蒺藜苜蓿全基因组中和天蓝苜蓿叶片转录组中的14-3-3基因,并对这些基因的结构、染色体定位、进化和在蒺藜苜蓿各个器官及不同胁迫处理下的表达情况进行分析,推测各个基因可能的功能。从蒺藜苜蓿的基因组,鉴定出11个14-3-3基因,这些基因在大豆中均存在直系同源基因。其中10个基因有基因芯片的表达证据。从天蓝苜蓿的叶片转录组中,筛选鉴定出6个14-3-3基因。蒺藜苜蓿14-3-3基因在各个组织和器官中特异性的表达,并可响应外界生物和非生物胁迫。本研究为进一步阐明蒺藜苜蓿中14-3-3基因铺平了道路,指明了方向。

Abstract:

Protein phosphorylation is an important signal transduction mechanism in all eukaryotes, and plays a central regulatory role in many fundamental processes of cell life, including cell division, differentiation, and apoptosis. 14-3-3 protein is present in all eukaryotes, recognizes and regulates phosphorylated protein activity,which is a central protein in the phosphorylated signaling network. The 14-3-3 genes in the genome of Medicago truncatula and the transcriptome of Medicago sativa were screened and identifiedin this research, and the structure,chromosome location, evolution and expression of these genes in various organs and different stress treatments of M. truncatula were studied. Moreover, the possible function of each gene was analyzed.Eleven 14-3-3 genes were identified from the genome of Medicago truncatula, and these genes were found to be orthologous to soybean14-3-3 genes, of which 10 genes had gene expression evidence. Six 14-3-3 genes were identified from leaf transcriptions of alfalfa. The gene of 14-3-3 of Medicago truncatulawas specifically expressed in various tissues and organs, and could respond to external cbiotic and abiotic stresses. This study might pave the way for the further elucidation of 14-3-3 gene in Medicago truncatula.

参考文献

Aitken A.,2002,Functional specificity in 14-3-3 isoform interactions through dimer formation and phosphorylation,Chromosome location of mammalian isoforms and variants,Plant Molecular Biology,50(6):993-1010

Hu B.,Jin J.P.,Guo A.Y.,Zhang H.,Luo J.C.,and Gao G.,2014,GSDS 2.0:an upgraded gene feature visualization server,Bioinformatics,31(8):1296-1297

Braun R.C.,Pedretti K.T.,Casavant T.L.,Scheetz T.E.,Birkett C.L.,and Roberts C.A.,2001,Parallelization of local blast service on workstation clusters,Future Generation Computer Systems,17(6):745-754

Finn R.D.,Clements J.,and Eddy S.R.,2011,Hmmer web server:interactive sequence similarity searching,Nucleic Acids Research,39(8):29-37

Ganguly S.,Weller J.L.,Ho A.,Chemineau P.,Malpaux B.,and Klein D.C.,2005,Melatonin synthesis:14-3-3-dependent activation and inhibition of arylalkylamine N-acetyltransferase mediated by phosphoserine-205,Proc Natl Acad Sci USA,102(4):1222-1227

Giacometti S.,Marrano C.A.,Bonza M.C.,Luoni L.,Limonta M.,and De Michelis M.I.,2012,Phosphorylation of serine residues in the N terminus modulates the activity of ACA8,a plasma membrane Ca2+-ATPase of Arabidopsis thaliana,Journal of Experimental Botany,63(3):1215-1224

Lee J.H.,and Lu H.,2011,14-3-3 gamma inhibition of MD-MX-mediated p21 turnover independent of p53,Journal of Biological Chemistry,286(7):5136-5142

Rosenquist M.,Alsterfjord M.,Larsson C.,and Sommarin M.,2001,Data mining the Arabidopsis genome reveals fifteen14-3-3 genes.Expression is demonstrated for two out of five novel genes,Plant Physiol.,127(1):142-149

譒ribar J.,Sherman N.E.,Prijatelj P.,Faure G.,Guben觢ek F.,Fox J.W.,Aitken A.,Pungercar J.,and Kri觩aj I.,2003,The eurotoxic phospholipase A2associates,through a non-phosphorylated binding motif,with 14-3-3 proteinγandεisoforms,Biochemical and Biophysical Research Communications,302(4):691-696

Tamura K.,Stecher G.,Peterson D.,Filipski A.,and Kumar S.,2013,MEGA6:molecular evolutionary genetics analysis version 6.0,Molecular Biology&Evolution,30(12):272-5-2729

Tang H.B.,Krishnakumar V.,Bidwell S.,Rosen B.,Chan A.,Zhou S.G.,Gentzbittel L.,Childs K.L.,Yandell M.,Gundlach H.,Mayer K.F.X.,Schwartz D.C.,and Town C.D.,2014,An improved genome release(version Mt4.0)for the model legume medicago truncatula,BMC Genomics,15(5):1-14

Würtele M.,Jelich-Ottmann C.,Wittinghofer A.,and Oecking C.,2003,Structural view of a fungal toxin acting on a 14-3-3regulatory complex,The EMBO Journal,22(5):987-994

基本信息:

DOI:10.13417/j.gab.036.005238

中图分类号:Q943.2

引用信息:

[1]李菲,何小红,张习敏,等.苜蓿14-3-3基因家族的鉴定与进化和特征分析[J].基因组学与应用生物学,2017,36(12):5238-5243.DOI:10.13417/j.gab.036.005238.

基金信息:

贵州省科学技术基金(2017GZ66249)资助

发布时间:

2017-12-25

出版时间:

2017-12-25

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